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Publications

2022

  • Allgower, F., Gamiz-Hernandez, A.P., Rutherford, A.W. and Kaila, V.R.I. (2022). Molecular Principles of Redox-Coupled Protonation Dynamics in Photosystem II. J Am Chem Soc, 144, 16: 7171-7180. doi: 10.1021/jacs.1c13041

  • Baserga, F., Vorkas, A., Crea, F., Schubert, L., Chen, J.-L., Redlich, A., La Greca, M., Storm, J., Oldemeyer, S., Hoffmann, K., Schlesinger, R. and Heberle, J. (2022). Membrane Protein Activity Induces Specific Molecular Changes in Nanodiscs Monitored by FTIR Difference Spectroscopy. Front Mol Biosci, 9. doi: 10.3389/fmolb.2022.915328.

  • Bondar, A.N. (2022). Graphs of Hydrogen-Bond Networks to Dissect Protein Conformational Dynamics. J Phys Chem B, 126, 22: 3973-3984. doi: 10.1021/acs.jpcb.2c00200.

  • Brunig, F.N., Geburtig, O., Canal, A.V., Kappler, J. and Netz, R.R. (2022). Time-Dependent Friction Effects on Vibrational Infrared Frequencies and Line Shapes of Liquid Water. J Phys Chem B, 126, 7: 1579-1589. doi: 10.1021/acs.jpcb.1c09481.

  • Crea, F., Vorkas, A., Redlich, A., Cruz, R., Shi, C., Trauner, D., Lange, A., Schlesinger, R. and Heberle, J. (2022). Photoactivation of a Mechanosensitive Channel. Front Mol Biosci, doi: 10.3389/fmolb.2022.905306

  • Dietler, J., Gelfert, R., Kaiser, J., Borin, V., Renzl, C., Pilsl, S., Ranzani, A.T., Garcia de Fuentes, A., Gleichmann, T., Diensthuber, R.P., Weyand, M., Mayer, G., Schapiro, I. and Moglich, A. (2022). Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine. Nat Commun, 13, 1: 2618. doi: 10.1038/s41467-022-30252-4

  • Golub, M., Gatcke, J., Subramanian, S., Kolsch, A., Darwish, T., Howard, J.K., Feoktystov, A., Matsarskaia, O., Martel, A., Porcar, L., Zouni, A. and Pieper, J. (2022). "Invisible" Detergents Enable a Reliable Determination of Solution Structures of Native Photosystems by Small-Angle Neutron Scattering. J Phys Chem B, 126, 15: 2824-2833. doi: 10.1021/acs.jpcb.2c01591

  • Heyne, K. (2022). Impact of Ultrafast Electric Field Changes on Photoreceptor Protein Dynamics. J Phys Chem B, 126, 3: 581-587. doi: 10.1021/acs.jpcb.1c08131

  • Karathanou, K., Lazaratos, M., Bertalan, E., Siemers, M. and Bondar, A.N. (2022). Conformational coupling and proton binding with dynamic hydrogen-bond networks. Biophysical Journal, 121, 3: 170a-170a. doi: 10.1016/j.bpj.2021.11.1886.

  • La Greca, M., Chen, J.L., Schubert, L., Kozuch, J., Berneiser, T., Terpitz, U., Heberle, J. and Schlesinger, R. (2022). The Photoreaction of the Proton-Pumping Rhodopsin 1 From the Maize Pathogenic Basidiomycete Ustilago maydis. Front Mol Biosci, 9, 826990. doi: 10.3389/fmolb.2022.826990

  • Lazaratos, M., Siemers, M., Brown, L.S. and Bondar, A.N. (2022). Conserved hydrogen-bond motifs of membrane transporters and receptors. Biochim Biophys Acta Biomembr, 1864, 6: 183896. doi: 10.1016/j.bbamem.2022.183896

  • Liese, S., Schlaich, A. and Netz, R.R. (2022). Dielectric constant of aqueous solutions of proteins and organic polymers from molecular dynamics simulations. J Chem Phys, 156, 22: 224902. doi: 10.1063/5.0089397.

  • Lopez, M.F., Dahl, M., Escobar, F.V., Bonomi, H.R., Kraskov, A., Michael, N., Mroginski, M.A., Scheerer, P. and Hildebrandt, P. (2022). Photoinduced reaction mechanisms in prototypical and bathy phytochromes. Phys Chem Chem Phys, 24, 19: 11967-11978. doi: 10.1039/d2cp00020b.

  • Mous, S., Gotthard, G., Ehrenberg, D., Sen, S., Weinert, T., Johnson, P.J.M., James, D., Nass, K., Furrer, A., Kekilli, D., Ma, P., Brunle, S., Casadei, C.M., Martiel, I., Dworkowski, F., Gashi, D., Skopintsev, P., Wranik, M., Knopp, G., Panepucci, E., Panneels, V., Cirelli, C., Ozerov, D., Schertler, G.F.X., Wang, M., Milne, C., Standfuss, J., Schapiro, I., Heberle, J. and Nogly, P. (2022). Dynamics and mechanism of a light-driven chloride pump. Science, 375, 6583: 845-851. doi: 10.1126/science.abj6663.

  • Nagano, S., Sadeghi, M., Balke, J., Fleck, M., Heckmann, N., Psakis, G. and Alexiev, U. (2022). Improved fluorescent phytochromes for in situ imaging. Sci Rep, 12, 1: 5587. doi: 10.1038/s41598-022-09169-x.

  • Saura, P., Riepl, D., Frey, D.M., Wikström, M. and Kaila, V.R.I. (2022). Electric fields control water-gated proton transfer in cytochrome c oxidase. PNAS, 119, 38. doi: 10.1073/pnas.2207761119.
  • Silapetere, A., Hwang, S., Hontani, Y., Fernandez Lahore, R.G., Balke, J., Escobar, F.V., Tros, M., Konold, P.E., Matis, R., Croce, R., Walla, P.J., Hildebrandt, P., Alexiev, U., Kennis, J.T.M., Sun, H., Utesch, T. and Hegemann, P. (2022). QuasAr Odyssey: the origin of fluorescence and its voltage sensitivity in microbial rhodopsins. Nature Communications, 13, 1: doi: 10.1038/s41467-022-33084-4.

  • Schubert, L., Langner, P., Ehrenberg, D., Lorenz-Fonfria, V.A. and Heberle, J. (2022). Protein conformational changes and protonation dynamics probed by a single shot using quantum-cascade-laser-based IR spectroscopy. J Chem Phys, 156, 20: 204201. doi: 10.1063/5.0088526.

  • Speck, D., Kleinau, G., Meininghaus, M., Erbe, A., Einfeldt, A., Szczepek, M., Scheerer, P. and Putter, V. (2022). Expression and Characterization of Relaxin Family Peptide Receptor 1 Variants. Front Pharmacol, 12, 826112. doi: 10.3389/fphar.2021.826112.

  • Voss, M., Kleinau, G., Gimber, N., Janek, K., Bredow, C., Thery, F., Impens, F., Schmoranzer, J., Scheerer, P., Kloetzel, P.M. and Beling, A. (2022). A cytosolic disulfide bridge-supported dimerization is crucial for stability and cellular distribution of Coxsackievirus B3 protein 3A. FEBS J, doi: 10.1111/febs.16368.

  • Weaver, J.B., Kozuch, J., Kirsh, J.M. and Boxer, S.G. (2022). Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments. J Am Chem Soc, 144, 17: 7562-7567. doi: 10.1021/jacs.2c00675.

  • Yaguchi, M., Jia, X., Schlesinger, R., Jiang, X., Ataka, K. and Heberle, J. (2022). Near-Infrared Activation of Sensory Rhodopsin II Mediated by NIR-to-Blue Upconversion Nanoparticles. Front Mol Biosci, 8, 782688. doi: 10.3389/fmolb.2021.782688.

  • Yang, Y., Stensitzki, T., Sauthof, L., Schmidt, A., Piwowarski, P., Velazquez Escobar, F., Michael, N., Nguyen, A.D., Szczepek, M., Brunig, F.N., Netz, R.R., Mroginski, M.A., Adam, S., Bartl, F., Schapiro, I., Hildebrandt, P., Scheerer, P. and Heyne, K. (2022). Ultrafast proton-coupled isomerization in the phototransformation of phytochrome. Nat Chem, doi: 10.1038/s41557-022-00944-x.

  • Zheng, C., Mao, Y., Kozuch, J., Atsango, A.O., Ji, Z., Markland, T.E. and Boxer, S.G. (2022). A two-directional vibrational probe reveals different electric field orientations in solution and an enzyme active site. Nat Chem, doi: 10.1038/s41557-022-00937-w.