Publications

Cover page of J. Phys. Chem. B (Oct. 2013)
Cover page of J. Phys. Chem. B (Oct. 2013) featuring the article by Bonthuis and Netz

2013

  • Ataka, K., Stripp, S.T., and Heberle, J. (2013). Surface-enhanced infrared absorption spectroscopy (SEIRAS) to probe monolayers of membrane proteins. Biochimica et Biophysica Acta (BBA) - Biomembranes 1828, 2283-2293.

  • Bonthuis, D.J., and Netz, R.R. (2013). Beyond the Continuum: How Molecular Solvent Structure Affects Electrostatics and Hydrodynamics at Solid-Electrolyte Interfaces. Journal of Physical Chemistry B 117, 11397-11413.

  • Escobar, F.V., Utesch, T., Narikawa, R., Ikeuchi, M., Mroginski, M.A., Gaertner, W., and Hildebrandt, P. (2013). Photoconversion Mechanism of the Second GAF Domain of Cyanobacteriochrome AnPixJ and the Cofactor Structure of Its Green-Absorbing State. Biochemistry 52, 4871-4880.

  • Glockner, C., Kern, J., Broser, M., Zouni, A., Yachandra, V., and Yano, J. (2013). Structural Changes of the Oxygen-evolving Complex in Photosystem II during the Catalytic Cycle. Journal of Biological Chemistry 288, 22607-22620.

  • Kern, J., Alonso-Mori, R., Tran, R., Hattne, J., Gildea, R.J., Echols, N., Gloeckner, C., Hellmich, J., Laksmono, H., Sierra, R.G., et al. (2013). Simultaneous Femtosecond X-ray Spectroscopy and Diffraction of Photosystem II at Room Temperature. Science 340, 491-495.

  • Kirchberg, K., Michel, H., and Alexiev, U. (2013). Exploring the entrance of proton pathways in cytochrome c oxidase from Paracoccus denitrificans: Surface charge, buffer capacity and redox-dependent polarity changes at the internal surface. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1827, 276-284.

  • Kozuch, J., von der Hocht, I., Hilbers, F., Michel, H., and Weidinger, I.M. (2013). Resonance Raman Characterization of the Ammonia-Generated Oxo Intermediate of Cytochrome c Oxidase from Paracoccus denitrificans. Biochemistry 52, 6197-6202.

  • Krause, N., Engelhard, C., Heberle, J., Schlesinger, R., and Bittl, R. (2013). Structural differences between the closed and open states of channelrhodopsin-2 as observed by EPR spectroscopy. FEBS Letters 587, 3309-3313.

  • Linke, M., Yang, Y., Zienicke, B., Hammam, M.A.S., von Haimberger, T., Zacarias, A., Inomata, K., Lamparter, T., and Heyne, K. (2013). Electronic transitions and heterogeneity of the bacteriophytochrome Pr absorption band: An angle balanced polarization resolved femtosecond VIS pump-IR probe study. Biophysical Journal 105, 1756-1766.

  • Lorenz-Fonfria, V.A., Resler, T., Krause, N., Nack, M., Gossing, M., von Mollard, G.F., Bamann, C., Bamberg, E., Schlesinger, R., and Heberle, J. (2013). Transient protonation changes in channelrhodopsin-2 and their relevance to channel gating. Proceedings of the National Academy of Sciences of the United States of America 110, E1273-E1281.

  • Mamatkulov, S., Fyta, M., and Netz, R.R. (2013). Force fields for divalent cations based on single-ion and ion-pair properties. Journal of Chemical Physics 138, 024505.

  • Mueh, F., and Zouni, A. (2013). The nonheme iron in photosystem II. Photosynthesis Research 116, 295-314.

  • Neumann-Verhoefen, M.-K., Neumann, K., Bamann, C., Radu, I., Heberle, J., Bamberg, E., and Wachtveitl, J. (2013). Ultrafast Infrared Spectroscopy on Channelrhodopsin-2 Reveals Efficient Energy Transfer from the Retinal Chromophore to the Protein. Journal of the American Chemical Society 135, 6968-6976.

  • Ritter, E., Piwowarski, P., Hegemann, P., and Bartl, F.J. (2013). Light-dark Adaptation of Channelrhodopsin C128T Mutant. Journal of Biological Chemistry 288, 10451-10458.

  • Salewski, J., Escobar, F.V., Kaminski, S., von Stetten, D., Keidel, A., Rippers, Y., Michael, N., Scheerer, P., Piwowarski, P., Bartl, F., Frankenberg-Dinkel, N., Ringsdorf, S., Gaertner, W., Lamparter, T., Mroginski, M.A., and Hildebrandt, P. (2013). Structure of the Biliverdin Cofactor in the Pfr State of Bathy and Prototypical Phytochromes. Journal of Biological Chemistry 288, 16800-16814.

  • Schneider, F., Gradmann, D., and Hegemann, P. (2013). Ion Selectivity and Competition in Channelrhodopsins. Biophysical Journal 105, 91-100.

  • Vogt, A., Wietek, J., and Hegemann, P. (2013). Gloeobacter Rhodopsin, Limitation of Proton Pumping at High Electrochemical Load. Biophysical Journal 105, 2055-2063.

  • von Hansen, Y., Gekle, S., and Netz, R.R. (2013). Anomalous Anisotropic Diffusion Dynamics of Hydration Water at Lipid Membranes. Physical Review Letters 111, 118103.

  • Woelke, A.L., Galstyan, G., Galstyan, A., Meyer, T., Heberle, J., and Knapp, E.-W. (2013a). Exploring the Possible Role of Glu286 in CcO by Electrostatic Energy Computations Combined with Molecular Dynamics. Journal of Physical Chemistry B 117, 12432-12441.

  • Woelke, A.L., Kuehne, C., Meyer, T., Galstyan, G., Dernedde, J., and Knapp, E.-W. (2013b). Understanding Selectin Counter-Receptor Binding from Electrostatic Energy Computations and Experimental Binding Studies. Journal of Physical Chemistry B 117, 16443-16454.

  • Zienicke, B., Molina, I., Glenz, R., Singer, P., Ehmer, D., Escobar, F.V., Hildebrandt, P., Diller, R., and Lamparter, T. (2013). Unusual spectral properties of bacteriophytochrome Agp2 result from a deprotonation of the chromophore in the red-absorbing form Pr. Journal of Biological Chemistry 288, 31738-31751.